BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F03SP1|AL427346
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1901 0.0
3x_Contig1255 522 e-148
>3x_Contig1806
Length = 53694
Score = 1901 bits (957), Expect = 0.0
Identities = 977/983 (99%), Gaps = 2/983 (0%)
Strand = Plus / Minus
Query: 1 ggatccatcagtgtttgttgggttttgggcttctttatatgtwttgttattgctgcctgc 60
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 43095 ggatccatcagtgtatgttgggttttgggcttctttatatgtattgttattgctgcctgc 43036
Query: 61 tcctcacaagacgtcgctgctattgtagaaactaaatttcaccaacctttggctcaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43035 tcctcacaagacgtcgctgctattgtagaaactaaatttcaccaacctttggctcaaatt 42976
Query: 121 ctatttgacgccttaggcaaaagatggaccattgctatcatggtccttattgccttctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42975 ctatttgacgccttaggcaaaagatggaccattgctatcatggtccttattgccttctgc 42916
Query: 181 caatttttgatggcagcttctatcttaactgctatctccagacaaatttgggcttttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42915 caatttttgatggcagcttctatcttaactgctatctccagacaaatttgggcttttgcc 42856
Query: 241 cgtgatgatggattaccgttctcttcctggatcaaagtcgtcaatatcaagctatcgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42855 cgtgatgatggattaccgttctcttcctggatcaaagtcgtcaatatcaagctatcgtct 42796
Query: 301 ccattgagagcaacctgggtcggcgctggtgccgctttggccattggttgtttgtgcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42795 ccattgagagcaacctgggtcggcgctggtgccgctttggccattggttgtttgtgcttg 42736
Query: 361 attggcccagtagcatcttcagcattattctccttggctgtttctgcgaactacttttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42735 attggcccagtagcatcttcagcattattctccttggctgtttctgcgaactacttttcc 42676
Query: 421 tggatggttccaaacttgttgagaatgacttatgggaaagatgtattcaccccgggtgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42675 tggatggttccaaacttgttgagaatgacttatgggaaagatgtattcaccccgggtgct 42616
Query: 481 tttttcatggggaagtatctttctccagtggtaaattggatttctatcgtatttgavatt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 42615 tttttcatggggaagtatctttctccagtggtaaattggatttctatcgtatttgaaatt 42556
Query: 541 ttcatgatattattagttttcttcccagcggatcagcacggcatcaccccagacacgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42555 ttcatgatattattagttttcttcccagcggatcagcacggcatcaccccagacacgatg 42496
Query: 601 aactacagtgtagttttcattggcgcagtatgggtcttgcctacgatttactatctcgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42495 aactacagtgtagttttcattggcgcagtatgggtcttgcctacgatttactatctcgtt 42436
Query: 661 tacaagtacaagttctatagtggtccaaaatcaaacttgacagacgaagaatatgaggag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42435 tacaagtacaagttctatagtggtccaaaatcaaacttgacagacgaagaatatgaggag 42376
Query: 721 aaggtcggtcaagacgttcttgacgctatcttatccaaacaccaggactaaacaaaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42375 aaggtcggtcaagacgttcttgacgctatcttatccaaacaccaggactaaacaaaacat 42316
Query: 781 atgagggttcataatatttgctgcctgcgggatatttaaatgcagtatatatacgtatac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42315 atgagggttcataatatttgctgcctgcgggatatttaaatgcagtatatatacgtatac 42256
Query: 841 caatttataaataaacttactcaaatgaaataattaaaactatgatgaatacatcaaagc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42255 caatttataaataaacttactcaaatgaaataattaaaactatgatgaatacatcaaagc 42196
Query: 901 attatcctgggtcctagggaattacttggttcggtatatgctactcttgcctcttaaaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42195 attatcctgggtcctagggaattacttggttcggtatatgctactcttgcctcttaaaag 42136
Query: 961 t-aaccaaa-cmataacgagaga 981
| ||||||| | |||||||||||
Sbjct: 42135 taaaccaaaccaataacgagaga 42113
>3x_Contig1255
Length = 5009
Score = 522 bits (263), Expect = e-148
Identities = 631/755 (83%)
Strand = Plus / Plus
Query: 1 ggatccatcagtgtttgttgggttttgggcttctttatatgtwttgttattgctgcctgc 60
||||| |||||||| |||||| ||||||| |||||||| ||| |||| ||||||||||||
Sbjct: 1182 ggatctatcagtgtatgttggtttttgggtttctttatttgtattgtcattgctgcctgc 1241
Query: 61 tcctcacaagacgtcgctgctattgtagaaactaaatttcaccaacctttggctcaaatt 120
||||| |||||||| ||||| ||||| | ||||||||||||||||| | || ||| |
Sbjct: 1242 tcctcgcaagacgtagctgcacttgtaaatactaaatttcaccaaccactagcgcaagtc 1301
Query: 121 ctatttgacgccttaggcaaaagatggaccattgctatcatggtccttattgccttctgc 180
|||| || ||||| || |||| ||||| |||||||||||| |||||| || |||||
Sbjct: 1302 ttattcgatgccttgggtaaaaagtggactattgctatcatgacccttatcgcattctgt 1361
Query: 181 caatttttgatggcagcttctatcttaactgctatctccagacaaatttgggcttttgcc 240
|| ||||||||||||||||| | ||| ||||| ||||||||||||||||||||||| ||
Sbjct: 1362 cagtttttgatggcagcttcaagcttgactgcaatctccagacaaatttgggctttcgct 1421
Query: 241 cgtgatgatggattaccgttctcttcctggatcaaagtcgtcaatatcaagctatcgtct 300
|| |||||||| ||||| || || || ||||| || || || ||| | ||| | |||||
Sbjct: 1422 cgcgatgatgggttaccattttcgtcgtggataaaggttgttaatgttaagttgtcgtcc 1481
Query: 301 ccattgagagcaacctgggtcggcgctggtgccgctttggccattggttgtttgtgcttg 360
||||| |||||||| ||||| ||||| || | ||| |||| ||||| ||| | || |||
Sbjct: 1482 ccattaagagcaacttgggtaggcgcaggcgtcgccctggctattggatgtctatgtttg 1541
Query: 361 attggcccagtagcatcttcagcattattctccttggctgtttctgcgaactacttttcc 420
||||||||||| || |||||||| |||||||| ||| | ||||| |||||||| ||
Sbjct: 1542 attggcccagttgcttcttcagctttattctcattgtacatctctgctaactacttctca 1601
Query: 421 tggatggttccaaacttgttgagaatgacttatgggaaagatgtattcaccccgggtgct 480
|||||| ||||||||||| | ||||||||||| || |||||||| || |||||||||||
Sbjct: 1602 tggatgcttccaaacttgctaagaatgacttacggtaaagatgtgtttaccccgggtgca 1661
Query: 481 tttttcatggggaagtatctttctccagtggtaaattggatttctatcgtatttgavatt 540
||||||||||||||||| || |||||||| |||||||||||||| ||| | ||||| ||
Sbjct: 1662 tttttcatggggaagtacctctctccagttgtaaattggatttccatcatctttgaactt 1721
Query: 541 ttcatgatattattagttttcttcccagcggatcagcacggcatcaccccagacacgatg 600
||||||||| || |||| ||||| ||| | || ||||| || || || |||||||| |||
Sbjct: 1722 ttcatgatactactagtcttctttccaactgaacagcatggtataactccagacactatg 1781
Query: 601 aactacagtgtagttttcattggcgcagtatgggtcttgcctacgatttactatctcgtt 660
||||||||||| ||||||||||| ||||||||| ||||| | || ||||| ||| || ||
Sbjct: 1782 aactacagtgttgttttcattggtgcagtatggttcttggcaacaatttattatttcatt 1841
Query: 661 tacaagtacaagttctatagtggtccaaaatcaaacttgacagacgaagaatatgaggag 720
|||||| | |||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct: 1842 tacaagcataagttctataaaggtccaaaatcaaacttgacagacgaggaatacgaggaa 1901
Query: 721 aaggtcggtcaagacgttcttgacgctatcttatc 755
|| ||||||||||||||||||||||||||||||||
Sbjct: 1902 aacgtcggtcaagacgttcttgacgctatcttatc 1936
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6644
Number of Sequences: 1807
Number of extensions: 6644
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)